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This is a video demonstration on how to set up a Windows-based PC for using R and R Studio. It was used for the 2017 BigTap Summer boot camp as precourse material.
V3b R and RStudio Windows installation (2017)
From James C Fleet
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The was a precourse exercise for the 2017 BigTap Boot camp. It explains how to set up an Apple personal computer for using R and R studio.
V3a Installing R and RStudio MacOSX (2017)
From James C Fleet
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Intro to course resources 2018 boot camp
From James C Fleet
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This is an overview of the topics to be covered in the Purdue Summer boot camp on big data training for biomedical researchers.
Course content overview 2018 boot camp
From James C Fleet
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This is the video of Linear Regression introduction
Unit 3 Session 2_Linear Regression
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In this video we explain the concepts for searching DNA to find transcription factor binding sites. This includes a discussion of databases and tools as well as a…
Transcription Factor Binding Site Prediction in…
From James C Fleet
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In this video we use IGV to visualize DNA-seq data. The demonstration uses date from the ENCODE project as well as BED file made from supplemental data in a published…
Using IGV to visualize DNA-seq data
From James C Fleet
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This video provides an overview of the ENCODE project and tours through the ENCODE data portal.
Overview of ENCODE
From James C Fleet
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The following lecture is a continued introduction about the second case study, its data collection, data analysis, QC and interpretation.
Unit_4_Lecture_8
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This video is an introduction of the second case study, its background, and design.
Unit_4_Lecture_7
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This video introduces the principle of genome-wide association study or GWAS. Its design, data collection, data analysis principles and interpretation.
Unit_4_Lecture_6
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This video explains the principle of genetic association study, design, logistics, process and interpretation.
Unit_4_Lecture_5
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